Taking Charge of Your Fertility recommends changing the time that you wake up by 15-20 minutes each day to account for the time change. After 3-4 days you will be back on schedule.
I personally do not worry about Daylight Saving Time. Unless you are going to ovulate in the next 2-3 days (and even then) it shouldn't matter much. I am assuming you are charting to confirm that you are ovulating and not to time sex, in which case, your temps will still confirm your ovulation.
Good luck!